Search Analytics can be found under the 'Search Traffic' section and provides details of the keywords that drove clicks to your website, based on data for up to the last 90 days. The difference with Google's version is that you can filter the data to put extra context around the keywords, such as filtering by country to see keyword popularity based on country, which can be useful when carrying out keyword research for websites that service more than one country.
In a nutshell, Long Tail Pro helps you quickly find keywords in bulk based on a seed keyword that you input.  In addition to returning hundreds of related keywords, the tool also shows search volume (monthly search volume), advertiser bid, number of words, rank value, and my favorite Keyword Competitiveness (helps you judge the competition and keyword difficulty).
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